Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EIF5B ENSPTRG00000012279

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Description

eukaryotic translation initiation factor 5B [Source:VGNC Symbol;Acc:VGNC:236]

Location

Chromosome 2A: 98,252,808-98,315,008 forward strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 4 transcripts (splice variants), 107 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000022802.6	EIF5B-201	4236	1220aa	ENSPTRP00000051806.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y0F7 H2R8P2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000100916.1	EIF5B-202	3663	1220aa	ENSPTRP00000076043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGA3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000095217.1	EIF5B-203	3540	1179aa	ENSPTRP00000069242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RY42	-
ENSPTRT00000079423.1	EIF5B-204	3498	1165aa	ENSPTRP00000078935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPP5	-

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Summary

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