Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD8 ENSPTRG00000006124

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Description

chromodomain helicase DNA binding protein 8 [Source:VGNC Symbol;Acc:VGNC:3449]

Location

Chromosome 14: 5,102,759-5,173,844 reverse strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000011233.7	CHD8-201	8684	2589aa	ENSPTRP00000010392.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q7Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000067511.3	CHD8-202	8484	2581aa	ENSPTRP00000059098.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JI42 A0A6D2W601	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000073098.2	CHD8-203	7474	2302aa	ENSPTRP00000060840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VVF4 H2RH42	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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