Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smg5 ENSOSIG00000013022

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Description

SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]

Location

Primary_assembly VHIC01002466.1: 649,385-666,815 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOSIT00000026145.1	smg5-202	4324	1179aa	ENSOSIP00000024774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7Y880	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOSIT00000026144.1	smg5-201	4053	1103aa	ENSOSIP00000024773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7YAQ6	-
ENSOSIT00000026146.1	smg5-203	3512	990aa	ENSOSIP00000024775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C8DRE0	-
ENSOSIT00000026149.1	smg5-204	3485	981aa	ENSOSIP00000024778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7YC73	-
ENSOSIT00000026150.1	smg5-205	3470	973aa	ENSOSIP00000024779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7YD69	-

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Summary

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