Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: xrn1 ENSOJAG00000021263

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Description

5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]

Location

Primary_assembly 17: 21,193,875-21,217,527 reverse strand.

OJAV_1.1:CM012453.1

About this gene

This gene has 4 transcripts (splice variants), 217 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSOJAT00000046273.1	xrn1-201	6486	1604aa	ENSOJAP00000043430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOJAT00000046340.1	xrn1-202	4775	1531aa	ENSOJAP00000043491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOJAT00000046345.1	xrn1-203	4769	1529aa	ENSOJAP00000043496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOJAT00000046350.1	xrn1-204	3644	1154aa	ENSOJAP00000043501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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