Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PUM1 ENSOKIG00005015820

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Description

pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]

Location

Primary_assembly LG17: 21,763,781-21,797,172 forward strand.

Okis_V2:CM007734.2

About this gene

This gene has 10 transcripts (splice variants), 213 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOKIT00005044963.1	PUM1-201	6311	1163aa	ENSOKIP00005042653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MC01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOKIT00005045080.1	PUM1-202	6218	1132aa	ENSOKIP00005042768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GG66	-
ENSOKIT00005045094.1	PUM1-203	6212	1130aa	ENSOKIP00005042781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GGF6	-
ENSOKIT00005045112.1	PUM1-204	6113	1097aa	ENSOKIP00005042798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GFG7	-
ENSOKIT00005045138.1	PUM1-205	6005	1061aa	ENSOKIP00005042821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MC29	-
ENSOKIT00005045146.1	PUM1-206	5870	1016aa	ENSOKIP00005042829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GGJ1	-
ENSOKIT00005045296.1	PUM1-208	5796	1005aa	ENSOKIP00005042974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GFV4	-
ENSOKIT00005045307.1	PUM1-209	5706	975aa	ENSOKIP00005042985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GGX0	-
ENSOKIT00005045319.1	PUM1-210	5700	973aa	ENSOKIP00005042997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GGX9	-
ENSOKIT00005045155.1	PUM1-207	5558	912aa	ENSOKIP00005042838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7GK14	-

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Summary

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