Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CSDE1 ENSMMDG00005018036

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Description

cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]

Location

Primary_assembly 7: 31,048,648-31,062,317 forward strand.

fMyrMur1.1:LR597556.1

About this gene

This gene has 10 transcripts (splice variants) and 241 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMMDT00005048423.1	CSDE1-203	3607	860aa	ENSMMDP00005047480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A667ZXL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMMDT00005048389.1	CSDE1-201	3685	846aa	ENSMMDP00005047445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A667ZXH8	-
ENSMMDT00005048393.1	CSDE1-202	3667	840aa	ENSMMDP00005047450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A667ZXI3	-
ENSMMDT00005048626.1	CSDE1-204	3571	848aa	ENSMMDP00005047681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A668AR89	-
ENSMMDT00005048762.1	CSDE1-207	3517	830aa	ENSMMDP00005047814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A668AIL6	-
ENSMMDT00005048701.1	CSDE1-205	3481	818aa	ENSMMDP00005047754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A668AIF2	-
ENSMMDT00005048758.1	CSDE1-206	3355	776aa	ENSMMDP00005047810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A667ZYX6	-
ENSMMDT00005048808.1	CSDE1-208	3259	744aa	ENSMMDP00005047860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A667ZZ21	-
ENSMMDT00005048882.1	CSDE1-209	3244	739aa	ENSMMDP00005047934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A668AIX6	-
ENSMMDT00005048934.1	CSDE1-210	3226	733aa	ENSMMDP00005047986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A668ARS3	-

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Summary

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