Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rprd1b MGP_PahariEiJ_G0026026

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Description

regulation of nuclear pre-mRNA domain containing 1B [Source:MGI Symbol;Acc:MGI:1917720]

Location

Chromosome 3: 140,417,024-140,520,603 forward strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 7 transcripts (splice variants), 219 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0066795.1	Rprd1b-205	3232	326aa	MGP_PahariEiJ_P0066795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0066791.1	Rprd1b-201	4750	325aa	MGP_PahariEiJ_P0066791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066794.1	Rprd1b-204	1922	224aa	MGP_PahariEiJ_P0066794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066796.1	Rprd1b-206	764	193aa	MGP_PahariEiJ_P0066796	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066797.1	Rprd1b-207	427	142aa	MGP_PahariEiJ_P0066797	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066793.1	Rprd1b-203	4228	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0066792.1	Rprd1b-202	1594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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