Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Polr1a MGP_PahariEiJ_G0022230

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Description

polymerase (RNA) I polypeptide A [Source:MGI Symbol;Acc:MGI:1096397]

Location

Chromosome 2: 89,850,624-89,919,207 forward strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 10 transcripts (splice variants), 210 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0050352.1	Polr1a-202	9187	1716aa	MGP_PahariEiJ_P0050352	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0050360.1	Polr1a-210	3958	741aa	MGP_PahariEiJ_P0050360	Nonsense mediated decay	-
MGP_PahariEiJ_T0050351.1	Polr1a-201	3381	282aa	MGP_PahariEiJ_P0050351	Nonsense mediated decay	-
MGP_PahariEiJ_T0050358.1	Polr1a-208	625	47aa	MGP_PahariEiJ_P0050358	Nonsense mediated decay	-
MGP_PahariEiJ_T0050357.1	Polr1a-207	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0050354.1	Polr1a-204	3302	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050353.1	Polr1a-203	1420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050359.1	Polr1a-209	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050355.1	Polr1a-205	352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050356.1	Polr1a-206	345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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