Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chd7 MGP_CAROLIEiJ_G0025797

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Description

chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]

Location

Chromosome 4: 4,856,621-5,033,485 forward strand.

CAROLI_EIJ_v1.1:LT608246.1

About this gene

This gene has 8 transcripts (splice variants), 213 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0061371.1	Chd7-204	10208	2986aa	MGP_CAROLIEiJ_P0061371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7QY52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0061370.1	Chd7-203	9436	2986aa	MGP_CAROLIEiJ_P0061370	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7QY52	-
MGP_CAROLIEiJ_T0061373.1	Chd7-206	3454	941aa	MGP_CAROLIEiJ_P0061373	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0061369.1	Chd7-202	2387	631aa	MGP_CAROLIEiJ_P0061369	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0061372.1	Chd7-205	449	19aa	MGP_CAROLIEiJ_P0061372	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0061375.1	Chd7-208	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0061368.1	Chd7-201	4922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0061374.1	Chd7-207	9951	2985aa	MGP_CAROLIEiJ_P0061374	Unknown likely coding	A0A6P5PIN7	-

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Summary

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