Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]
Location
Chromosome 19: 23,686,904-23,857,614 forward strand.
CAROLI_EIJ_v1.1:LT608248.1
About this gene
This gene has 20 transcripts (splice variants), 206 orthologues and 32 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| MGP_CAROLIEiJ_T0048436.1 | Smarca2-202 | 5868 | 1602aa | MGP_CAROLIEiJ_P0048436 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P5NYD9 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_CAROLIEiJ_T0048435.1 | Smarca2-201 | 5864 | 1584aa | MGP_CAROLIEiJ_P0048435 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P5P100 | - |
| MGP_CAROLIEiJ_T0048439.1 | Smarca2-205 | 4581 | 1526aa | MGP_CAROLIEiJ_P0048439 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048449.1 | Smarca2-215 | 1861 | 236aa | MGP_CAROLIEiJ_P0048449 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048453.1 | Smarca2-219 | 971 | 119aa | MGP_CAROLIEiJ_P0048453 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048446.1 | Smarca2-212 | 942 | 254aa | MGP_CAROLIEiJ_P0048446 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048445.1 | Smarca2-211 | 929 | 254aa | MGP_CAROLIEiJ_P0048445 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048448.1 | Smarca2-214 | 879 | 276aa | MGP_CAROLIEiJ_P0048448 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P7QRQ3 | - |
| MGP_CAROLIEiJ_T0048450.1 | Smarca2-216 | 835 | 235aa | MGP_CAROLIEiJ_P0048450 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048447.1 | Smarca2-213 | 788 | 224aa | MGP_CAROLIEiJ_P0048447 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048454.1 | Smarca2-220 | 735 | 119aa | MGP_CAROLIEiJ_P0048454 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048440.1 | Smarca2-206 | 649 | 174aa | MGP_CAROLIEiJ_P0048440 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048451.1 | Smarca2-217 | 492 | 83aa | MGP_CAROLIEiJ_P0048451 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0048437.1 | Smarca2-203 | 5919 | 1511aa | MGP_CAROLIEiJ_P0048437 | Nonsense mediated decay | - | - |
| MGP_CAROLIEiJ_T0048452.1 | Smarca2-218 | 1463 | 113aa | MGP_CAROLIEiJ_P0048452 | Nonsense mediated decay | - | - |
| MGP_CAROLIEiJ_T0048442.1 | Smarca2-208 | 1584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - |
| MGP_CAROLIEiJ_T0048444.1 | Smarca2-210 | 426 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - |
| MGP_CAROLIEiJ_T0048443.1 | Smarca2-209 | 866 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0048441.1 | Smarca2-207 | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0048438.1 | Smarca2-204 | 5997 | 1593aa | MGP_CAROLIEiJ_P0048438 | Unknown likely coding | - | - |
