Transcript: Y54F10AM.4a.1 cone-1-202

Description

Protein CASP [Source:NCBI gene (formerly Entrezgene);Acc:175372]

Location

About this transcript

This transcript has 11 exons, is annotated with 31 domains and features and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y54F10AM.4a.1	cone-1-202	4206	1273aa	Y54F10AM.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y54F10AM.4c.1	cone-1-203	2080	621aa	Y54F10AM.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IA98	-
Y54F10AM.4b.1	cone-1-201	2076	619aa	Y54F10AM.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,206 bps, Translation length: 1,273 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BL02

Version

Y54F10AM.4a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase