NR LBD domain-containing protein [Source:NCBI gene;Acc:174202]
Chromosome II: 7,339,229-7,349,133 forward strand.
WBcel235:BX284602.5
This gene has 8 transcripts (splice variants), 4682 orthologues and 182 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F21D12.1c.3 | - | 3118 | 440aa | F21D12.1c.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F21D12.1b.1 | - | 2059 | 400aa | F21D12.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EBL9 | - |
| F21D12.1c.4 | - | 1559 | 440aa | F21D12.1c.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F21D12.1c.1 | - | 1536 | 440aa | F21D12.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F21D12.1e.1 | - | 1534 | 450aa | F21D12.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F21D12.1a.1 | - | 1508 | 448aa | F21D12.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F21D12.1d.1 | - | 1495 | 446aa | F21D12.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F21D12.1c.2 | - | 1480 | 440aa | F21D12.1c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
