Transcript: MGP_WSBEiJ_T0096338.1

Description

lysine (K)-specific demethylase 5C [Source:MGI Symbol;Acc:MGI:99781]

Gene Synonyms

D930009K15Rik, Jarid1c, Kiaa0234, Smcx, Xe169, mKIAA0234

Location

Chromosome X: 147,574,971-147,617,257 forward strand.

Reference strain equivalent

Kdm5c

About this transcript

This transcript has 24 exons, is annotated with 47 domains and features and maps to 435 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0035285.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0096338.1	-	5555	1439aa	MGP_WSBEiJ_P0096338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41178	F6WXI0 F7BXT3 P41230	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0096339.1	-	6103	1436aa	MGP_WSBEiJ_P0096339	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0096341.1	-	5175	1395aa	MGP_WSBEiJ_P0096341	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0096342.1	-	773	257aa	MGP_WSBEiJ_P0096342	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0096343.1	-	756	176aa	MGP_WSBEiJ_P0096343	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0096340.1	-	1872	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 5,555 bps, Translation length: 1,439 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41230

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS41178

Version

MGP_WSBEiJ_T0096338.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0096338.1

Summary

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Transcript: MGP_WSBEiJ_T0096338.1

Summary

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