Transcript: MGP_WSBEiJ_T0074941.1

Description

sarcoglycan, epsilon [Source:MGI Symbol;Acc:MGI:1329042]

Gene Synonyms

e-SG

Location

Chromosome 6: 1,400,834-1,478,222 reverse strand.

Reference strain equivalent

Sgce

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features and maps to 202 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0029603.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0074941.1	-	1776	473aa	MGP_WSBEiJ_P0074941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51715, CCDS51716, CCDS51717, CCDS51718	D3Z572 E9PX46 F6R6P2 F6ULV5 F6WKE4 F8WGM3 O70258	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0074944.1	-	1703	451aa	MGP_WSBEiJ_P0074944	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074942.1	-	1696	437aa	MGP_WSBEiJ_P0074942	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074947.1	-	1656	434aa	MGP_WSBEiJ_P0074947	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074946.1	-	1619	443aa	MGP_WSBEiJ_P0074946	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074945.1	-	1547	428aa	MGP_WSBEiJ_P0074945	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074943.1	-	1522	396aa	MGP_WSBEiJ_P0074943	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074951.1	-	936	58aa	MGP_WSBEiJ_P0074951	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0074950.1	-	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0074952.1	-	4416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0074953.1	-	3065	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0074949.1	-	2212	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0074948.1	-	1831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,776 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70258

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS51715, CCDS51716, CCDS51717, CCDS51718

Version

MGP_WSBEiJ_T0074941.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0074941.1

Summary

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Transcript: MGP_WSBEiJ_T0074941.1

Summary

About Us

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