Transcript: MGP_WSBEiJ_T0060774.1

Description

a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]

Gene Synonyms

AD56, MDC15, Mdc15, metargidin

Location

Chromosome 3: 88,825,697-88,837,163 reverse strand.

Reference strain equivalent

Adam15

About this transcript

This transcript has 24 exons, is annotated with 1 domain and feature and maps to 495 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0026675.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0060777.1	-	2975	864aa	MGP_WSBEiJ_P0060777	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0060776.1	-	2893	839aa	MGP_WSBEiJ_P0060776	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0060781.1	-	2799	815aa	MGP_WSBEiJ_P0060781	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0060780.1	-	1686	448aa	MGP_WSBEiJ_P0060780	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0060774.1	-	3914	864aa	MGP_WSBEiJ_P0060774	Nonsense mediated decay	CCDS17502, CCDS17503	O88839	-
MGP_WSBEiJ_T0060778.1	-	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0060779.1	-	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0060787.1	-	403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0060785.1	-	3053	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0060786.1	-	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0060784.1	-	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0060783.1	-	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0060782.1	-	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0060775.1	-	2800	841aa	MGP_WSBEiJ_P0060775	Unknown likely coding		-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 3,914 bps, Translation length: 864 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88839

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS17502, CCDS17503

Version

MGP_WSBEiJ_T0060774.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0060774.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_WSBEiJ_T0060774.1

Summary

About Us

Get help

Our sister sites

Follow us