Mouse WSB/EiJ (WSB_EiJ_v1)
Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]

Gene Synonyms

AI132332, SemB, Semab

Location
Reference strain equivalent
About this transcript

This transcript has 15 exons, is annotated with 27 domains and features and maps to 279 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_WSBEiJ_T0060539.1-3180760aaMGP_WSBEiJ_P0060539
 
Protein coding
CCDS17475D3YUM4 D3YVM6 D3YWK5
D3YWV5 D3YZ30 D3Z336
Q62178 V9GWW2 V9GXF5
V9GXH9
Ensembl Canonical
MGP_WSBEiJ_T0060546.1-845233aaMGP_WSBEiJ_P0060546
 
Protein coding
--
MGP_WSBEiJ_T0060548.1-706203aaMGP_WSBEiJ_P0060548
 
Protein coding
--
MGP_WSBEiJ_T0060551.1-63060aaMGP_WSBEiJ_P0060551
 
Protein coding
--
MGP_WSBEiJ_T0060549.1-506113aaMGP_WSBEiJ_P0060549
 
Protein coding
--
MGP_WSBEiJ_T0060552.1-38517aaMGP_WSBEiJ_P0060552
 
Protein coding
--
MGP_WSBEiJ_T0060545.1-866170aaMGP_WSBEiJ_P0060545
 
Nonsense mediated decay
--
MGP_WSBEiJ_T0060547.1-748180aaMGP_WSBEiJ_P0060547
 
Nonsense mediated decay
--
MGP_WSBEiJ_T0060543.1-69947aaMGP_WSBEiJ_P0060543
 
Nonsense mediated decay
--
MGP_WSBEiJ_T0060553.1-371No protein-
 
Processed transcript
--
MGP_WSBEiJ_T0060541.1-2487No protein-
 
Retained intron
--
MGP_WSBEiJ_T0060542.1-2355No protein-
 
Retained intron
--
MGP_WSBEiJ_T0060540.1-2108No protein-
 
Retained intron
--
MGP_WSBEiJ_T0060544.1-712No protein-
 
Retained intron
--
MGP_WSBEiJ_T0060550.1-465No protein-
 
Retained intron
--
Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,180 bps, Translation length: 760 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62178

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS17475

Version

MGP_WSBEiJ_T0060539.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.