Transcript: MGP_WSBEiJ_T0058119.1

Description

sorting nexin family member 21 [Source:MGI Symbol;Acc:MGI:1917729]

Gene Synonyms

5730407K14Rik, AI481716

Location

Chromosome 2: 168,966,725-168,973,386 forward strand.

Reference strain equivalent

Snx21

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features and maps to 195 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0026122.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0058120.1	-	2590	363aa	MGP_WSBEiJ_P0058120	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0058121.1	-	1825	142aa	MGP_WSBEiJ_P0058121	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0058119.1	-	1446	148aa	MGP_WSBEiJ_P0058119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38328	G3UWM2 G3UY23 G3UYL5 G3UYX2 Q3UR97	-
MGP_WSBEiJ_T0058122.1	-	1243	151aa	MGP_WSBEiJ_P0058122	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0058123.1	-	383	47aa	MGP_WSBEiJ_P0058123	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0058125.1	-	1604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0058124.1	-	3262	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,446 bps, Translation length: 148 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UR97

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS38328

Version

MGP_WSBEiJ_T0058119.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0058119.1

Summary

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Transcript: MGP_WSBEiJ_T0058119.1

Summary

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