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Transcript: MGP_WSBEiJ_T0048475.1

Description

protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]

Gene Synonyms

2010005A06Rik, AI585920

Location

Chromosome 18: 36,093,259-36,119,455 reverse strand.

Reference strain equivalent

Pcdh1

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features and maps to 123 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0023630.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_WSBEiJ_T0048476.1-38891077aaMGP_WSBEiJ_P0048476
 
Protein coding
-Ensembl Canonical
MGP_WSBEiJ_T0048475.1-5425360aaMGP_WSBEiJ_P0048475
 
Protein coding
CCDS29197A0A0A6YX79 A0A0A6YY88 E0CXD4
F7BJK1 Q8CFX3 		-
MGP_WSBEiJ_T0048477.1-39021038aaMGP_WSBEiJ_P0048477
 
Protein coding
--
MGP_WSBEiJ_T0048478.1-38801038aaMGP_WSBEiJ_P0048478
 
Protein coding
--
MGP_WSBEiJ_T0048479.1-43460aaMGP_WSBEiJ_P0048479
 
Protein coding
--
MGP_WSBEiJ_T0048480.1-23445aaMGP_WSBEiJ_P0048480
 
Protein coding
--

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 5,425 bps, Translation length: 360 residues

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS29197

Version

MGP_WSBEiJ_T0048475.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.