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Transcript: MGP_WSBEiJ_T0046790.1

Description

runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]

Gene Synonyms

AML3, Cbf, Cbfa-1, Cbfa1, LS3, Osf2, PEBP2 alpha A, PEBP2aA, Pebp2a1, Pebpa2a, SL3-3 enhancer factor 1, polyomavirus enhancer binding factor 2 (PEBP2)

Location

Chromosome 17: 45,551,554-45,804,917 reverse strand.

Reference strain equivalent

Runx2

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features and maps to 111 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0023056.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_WSBEiJ_T0046797.1-1791596aaMGP_WSBEiJ_P0046797
 
Protein coding
-Ensembl Canonical
MGP_WSBEiJ_T0046792.1-6434514aaMGP_WSBEiJ_P0046792
 
Protein coding
--
MGP_WSBEiJ_T0046791.1-5869528aaMGP_WSBEiJ_P0046791
 
Protein coding
--
MGP_WSBEiJ_T0046793.1-2983421aaMGP_WSBEiJ_P0046793
 
Protein coding
--
MGP_WSBEiJ_T0046794.1-2316528aaMGP_WSBEiJ_P0046794
 
Protein coding
--
MGP_WSBEiJ_T0046796.1-1607506aaMGP_WSBEiJ_P0046796
 
Protein coding
--
MGP_WSBEiJ_T0046795.1-1565492aaMGP_WSBEiJ_P0046795
 
Protein coding
--
MGP_WSBEiJ_T0046799.1-693230aaMGP_WSBEiJ_P0046799
 
Protein coding
--
MGP_WSBEiJ_T0046801.1-440146aaMGP_WSBEiJ_P0046801
 
Protein coding
--
MGP_WSBEiJ_T0046790.1-2818283aaMGP_WSBEiJ_P0046790
 
Nonsense mediated decay
CCDS37624, CCDS50116, CCDS70815E0CY45 E0CZ12 E0CZC6
E9PUK7 F6TRA6 F7CN98
F7CZB5 F8WHN7 Q08775
Q1PAG7 		-
MGP_WSBEiJ_T0046798.1-1479106aaMGP_WSBEiJ_P0046798
 
Nonsense mediated decay
--
MGP_WSBEiJ_T0046802.1-40850aaMGP_WSBEiJ_P0046802
 
Nonsense mediated decay
--
MGP_WSBEiJ_T0046807.1-558No protein-
 
Retained intron
--
MGP_WSBEiJ_T0046800.1-1245341aaMGP_WSBEiJ_P0046800
 
Unknown likely coding
--

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,818 bps, Translation length: 283 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08775

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS37624, CCDS50116, CCDS70815

Version

MGP_WSBEiJ_T0046790.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.