Transcript: MGP_WSBEiJ_T0046450.1

Description

valyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1916165]

Gene Synonyms

1190004I24Rik, Kiaa1885, Vars2l, mKIAA1885

Location

Chromosome 17: 35,619,973-35,631,468 reverse strand.

Reference strain equivalent

Vars2

About this transcript

This transcript has 29 exons, is annotated with 28 domains and features and maps to 357 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0022932.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0046450.1	-	4422	1060aa	MGP_WSBEiJ_P0046450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37602	E9PWQ5 F6YJY2 F6Z939 F7A8L1 Q3U2A8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0046452.1	-	2507	580aa	MGP_WSBEiJ_P0046452	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0046453.1	-	1972	214aa	MGP_WSBEiJ_P0046453	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0046457.1	-	832	112aa	MGP_WSBEiJ_P0046457	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0046461.1	-	718	75aa	MGP_WSBEiJ_P0046461	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0046451.1	-	3800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046460.1	-	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046454.1	-	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046458.1	-	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046459.1	-	618	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046455.1	-	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0046456.1	-	319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 4,422 bps, Translation length: 1,060 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3U2A8

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS37602

Version

MGP_WSBEiJ_T0046450.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0046450.1

Summary

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Transcript: MGP_WSBEiJ_T0046450.1

Summary

About Us

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