Transcript: MGP_WSBEiJ_T0030535.1

Description

synergin, gamma [Source:MGI Symbol;Acc:MGI:1354742]

Gene Synonyms

Ap1gbp1, L71-5, SYNG, Syng

Location

Chromosome 11: 84,661,588-84,744,052 forward strand.

Reference strain equivalent

Synrg

About this transcript

This transcript has 20 exons, is annotated with 23 domains and features and maps to 354 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0018224.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0030538.1	-	3990	1329aa	MGP_WSBEiJ_P0030538	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0030535.1	-	7112	1138aa	MGP_WSBEiJ_P0030535	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25181	F6YUG5 Q5SV85 V9GX40 V9GXD9	-
MGP_WSBEiJ_T0030536.1	-	3995	1306aa	MGP_WSBEiJ_P0030536	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030537.1	-	3651	1216aa	MGP_WSBEiJ_P0030537	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030540.1	-	767	255aa	MGP_WSBEiJ_P0030540	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030539.1	-	734	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0030542.1	-	1943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0030541.1	-	618	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0030543.1	-	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 7,112 bps, Translation length: 1,138 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SV85

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS25181

Version

MGP_WSBEiJ_T0030535.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0030535.1

Summary

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Transcript: MGP_WSBEiJ_T0030535.1

Summary

About Us

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