Transcript: MGP_WSBEiJ_T0030430.1

Description

ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]

Gene Synonyms

D11Wsu78e

Location

Chromosome 11: 83,398,562-83,420,871 forward strand.

Reference strain equivalent

Lig3

About this transcript

This transcript has 20 exons, is annotated with 43 domains and features and maps to 408 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0018191.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0030431.1	-	5957	1015aa	MGP_WSBEiJ_P0030431	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0030438.1	-	5809	1015aa	MGP_WSBEiJ_P0030438	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030430.1	-	4569	1015aa	MGP_WSBEiJ_P0030430	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25147, CCDS70266	B1AT03 G3UYI8 K4DI59 Q3TJN5 Q3UC82 Q80ZH7	-
MGP_WSBEiJ_T0030435.1	-	3645	1014aa	MGP_WSBEiJ_P0030435	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030434.1	-	3640	1014aa	MGP_WSBEiJ_P0030434	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030433.1	-	3065	956aa	MGP_WSBEiJ_P0030433	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030436.1	-	1785	431aa	MGP_WSBEiJ_P0030436	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030437.1	-	1782	431aa	MGP_WSBEiJ_P0030437	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030441.1	-	805	177aa	MGP_WSBEiJ_P0030441	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0030432.1	-	2902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0030439.1	-	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0030440.1	-	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,569 bps, Translation length: 1,015 residues

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS25147, CCDS70266

Version

MGP_WSBEiJ_T0030430.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0030430.1

Summary

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Transcript: MGP_WSBEiJ_T0030430.1

Summary

About Us

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