Transcript: MGP_WSBEiJ_T0019872.1

Description

phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]

Gene Synonyms

4921507K24Rik, Plcd

Location

Chromosome 1: 74,404,728-74,431,616 forward strand.

Reference strain equivalent

Plcd4

About this transcript

This transcript has 18 exons, is annotated with 2 domains and features and maps to 250 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0015569.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0019873.1	-	4648	807aa	MGP_WSBEiJ_P0019873	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0019874.1	-	4552	775aa	MGP_WSBEiJ_P0019874	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0019879.1	-	2977	807aa	MGP_WSBEiJ_P0019879	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0019876.1	-	2720	775aa	MGP_WSBEiJ_P0019876	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0019877.1	-	2692	798aa	MGP_WSBEiJ_P0019877	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0019872.1	-	4682	574aa	MGP_WSBEiJ_P0019872	Nonsense mediated decay	CCDS35616, CCDS35617	D6RGN2 Q8K3R3	-
MGP_WSBEiJ_T0019880.1	-	3011	574aa	MGP_WSBEiJ_P0019880	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0019881.1	-	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0019878.1	-	1912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0019875.1	-	1749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0019882.1	-	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 18, Coding exons: 11, Transcript length: 4,682 bps, Translation length: 574 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K3R3

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS35616, CCDS35617

Version

MGP_WSBEiJ_T0019872.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0019872.1

Summary

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Transcript: MGP_WSBEiJ_T0019872.1

Summary

About Us

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