Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
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External References
- General identifiers
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Supporting evidence
ID History
- Transcript history
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Transcript: MGP_PahariEiJ_T0063026.1 Scn2a-206

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Description

sodium channel, voltage-gated, type II, alpha [Source:MGI Symbol;Acc:MGI:98248]

Location

Chromosome 3: 51,890,428-51,973,315 forward strand.

About this transcript

This transcript has 26 exons and is annotated with 116 domains and features.

Gene

This transcript is a product of gene MGP_PahariEiJ_G0025053.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0063021.1	Scn2a-201	8950	2006aa	MGP_PahariEiJ_P0063021	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0063026.1	Scn2a-206	8706	2006aa	MGP_PahariEiJ_P0063026	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0063025.1	Scn2a-205	6352	2006aa	MGP_PahariEiJ_P0063025	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0063022.1	Scn2a-202	1809	504aa	MGP_PahariEiJ_P0063022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0063028.1	Scn2a-208	577	106aa	MGP_PahariEiJ_P0063028	Nonsense mediated decay	-
MGP_PahariEiJ_T0063029.1	Scn2a-209	514	98aa	MGP_PahariEiJ_P0063029	Nonsense mediated decay	-
MGP_PahariEiJ_T0063023.1	Scn2a-203	2445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0063024.1	Scn2a-204	1496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0063027.1	Scn2a-207	698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Protein summary

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Protein domains for MGP_PahariEiJ_P0063026.

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