Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pde7a MGP_PahariEiJ_G0026316

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Description

phosphodiesterase 7A [Source:NCBI gene;Acc:110320154]

Location

Chromosome 4: 14,914,068-15,001,880 reverse strand.

PAHARI_EIJ_v1.1:LT608287.1

About this gene

This gene has 10 transcripts (splice variants), 253 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0067999.1	Pde7a-201	6830	482aa	MGP_PahariEiJ_P0067999	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0068000.1	Pde7a-202	4786	456aa	MGP_PahariEiJ_P0068000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068006.1	Pde7a-208	383	68aa	MGP_PahariEiJ_P0068006	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068005.1	Pde7a-207	910	176aa	MGP_PahariEiJ_P0068005	Nonsense mediated decay	-
MGP_PahariEiJ_T0068003.1	Pde7a-205	724	31aa	MGP_PahariEiJ_P0068003	Nonsense mediated decay	-
MGP_PahariEiJ_T0068002.1	Pde7a-204	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0068008.1	Pde7a-210	245	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0068004.1	Pde7a-206	1158	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0068001.1	Pde7a-203	822	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0068007.1	Pde7a-209	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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