Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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ID History
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Gene: Brat1 MGP_PahariEiJ_G0024526

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Description

BRCA1-associated ATM activator 1 [Source:MGI Symbol;Acc:MGI:1891679]

Location

Chromosome 23: 30,806,861-30,821,524 forward strand.

PAHARI_EIJ_v1.1:LT608309.1

About this gene

This gene has 5 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0060096.1	Brat1-204	3436	867aa	MGP_PahariEiJ_P0060096	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0060097.1	Brat1-205	3226	822aa	MGP_PahariEiJ_P0060097	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060093.1	Brat1-201	3028	315aa	MGP_PahariEiJ_P0060093	Nonsense mediated decay	-
MGP_PahariEiJ_T0060095.1	Brat1-203	3163	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0060094.1	Brat1-202	2150	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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