Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Scube3 MGP_PahariEiJ_G0023631

.

Description

signal peptide, CUB domain, EGF-like 3 [Source:MGI Symbol;Acc:MGI:3045253]

Location

Chromosome 21: 23,131,143-23,164,239 forward strand.

PAHARI_EIJ_v1.1:LT608306.1

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0055893.1	Scube3-201	6530	951aa	MGP_PahariEiJ_P0055893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0055896.1	Scube3-204	3944	785aa	MGP_PahariEiJ_P0055896	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0055897.1	Scube3-205	3978	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0055895.1	Scube3-203	2939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0055898.1	Scube3-206	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0055894.1	Scube3-202	6373	967aa	MGP_PahariEiJ_P0055894	Unknown likely coding	-

.

Summary

.

.