Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ddx47 MGP_PahariEiJ_G0022748

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Description

DEAD box helicase 47 [Source:MGI Symbol;Acc:MGI:1915005]

Location

Chromosome 2: 149,984,199-149,996,788 forward strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 12 transcripts (splice variants), 210 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0052833.1	Ddx47-201	1762	455aa	MGP_PahariEiJ_P0052833	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0052844.1	Ddx47-212	2962	61aa	MGP_PahariEiJ_P0052844	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052840.1	Ddx47-208	1139	379aa	MGP_PahariEiJ_P0052840	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052841.1	Ddx47-209	1078	359aa	MGP_PahariEiJ_P0052841	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052835.1	Ddx47-203	607	196aa	MGP_PahariEiJ_P0052835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052838.1	Ddx47-206	551	180aa	MGP_PahariEiJ_P0052838	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052834.1	Ddx47-202	435	138aa	MGP_PahariEiJ_P0052834	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0052842.1	Ddx47-210	700	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0052837.1	Ddx47-205	3888	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0052836.1	Ddx47-204	957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0052843.1	Ddx47-211	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0052839.1	Ddx47-207	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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