Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc11a2 MGP_PahariEiJ_G0020291

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Description

solute carrier family 11 member 2 [Source:NCBI gene;Acc:110334498]

Location

Chromosome 17: 64,919,310-64,958,121 reverse strand.

PAHARI_EIJ_v1.1:LT608298.1

About this gene

This gene has 8 transcripts (splice variants), 278 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0043181.1	Slc11a2-201	3009	568aa	MGP_PahariEiJ_P0043181	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0043182.1	Slc11a2-202	4568	561aa	MGP_PahariEiJ_P0043182	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043183.1	Slc11a2-203	718	220aa	MGP_PahariEiJ_P0043183	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043185.1	Slc11a2-205	695	170aa	MGP_PahariEiJ_P0043185	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043188.1	Slc11a2-208	393	50aa	MGP_PahariEiJ_P0043188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043187.1	Slc11a2-207	391	110aa	MGP_PahariEiJ_P0043187	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043186.1	Slc11a2-206	393	68aa	MGP_PahariEiJ_P0043186	Nonsense mediated decay	-
MGP_PahariEiJ_T0043184.1	Slc11a2-204	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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