Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tspoap1 MGP_PahariEiJ_G0018065

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Description

TSPO associated protein 1 [Source:MGI Symbol;Acc:MGI:2450877]

Location

Chromosome 14: 55,404,369-55,430,036 forward strand.

PAHARI_EIJ_v1.1:LT608308.1

About this gene

This gene has 10 transcripts (splice variants), 187 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0035791.1	Tspoap1-201	7608	1840aa	MGP_PahariEiJ_P0035791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0035792.1	Tspoap1-202	7380	1780aa	MGP_PahariEiJ_P0035792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0035795.1	Tspoap1-205	2350	383aa	MGP_PahariEiJ_P0035795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0035794.1	Tspoap1-204	752	250aa	MGP_PahariEiJ_P0035794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0035799.1	Tspoap1-209	508	168aa	MGP_PahariEiJ_P0035799	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0035793.1	Tspoap1-203	386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0035796.1	Tspoap1-206	3492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0035797.1	Tspoap1-207	2680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0035800.1	Tspoap1-210	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0035798.1	Tspoap1-208	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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