Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Trap1 MGP_PahariEiJ_G0016105

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Description

TNF receptor associated protein 1 [Source:NCBI gene;Acc:110329522]

Location

Chromosome 12: 326,511-362,149 reverse strand.

PAHARI_EIJ_v1.1:LT608305.1

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027561.1	Trap1-201	2312	705aa	MGP_PahariEiJ_P0027561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027563.1	Trap1-203	428	111aa	MGP_PahariEiJ_P0027563	Nonsense mediated decay	-
MGP_PahariEiJ_T0027562.1	Trap1-202	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027564.1	Trap1-204	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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