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Mouse NZO/HlLtJ (NZO_HlLtJ_v1) ▼

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Transcript: MGP_NZOHlLtJ_T0037870.1

Description

patched 1 [Source:MGI Symbol;Acc:MGI:105373]

Gene Synonyms

A230106A15Rik, PTCHGN, Patched 1, Ptc, Ptc1, Ptch, mes, patched c isoform, patched eGN isoform

Location

Chromosome 13: 62,528,451-62,587,295 reverse strand.

Reference strain equivalent

Ptch1

About this transcript

This transcript has 24 exons, is annotated with 41 domains and features and maps to 411 oligo probes.

Gene

This transcript is a product of gene MGP_NZOHlLtJ_G0021100.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_NZOHlLtJ_T0037870.1-70911434aaMGP_NZOHlLtJ_P0037870
 
Protein coding
CCDS26592A0A0A6YVW7 A0A0A6YVX7 A0A0A6YWC4
A0A0A6YWZ4 Q5R1U4 Q61115
Ensembl Canonical
MGP_NZOHlLtJ_T0037876.1-1123326aaMGP_NZOHlLtJ_P0037876
 
Protein coding
--
MGP_NZOHlLtJ_T0037874.1-849174aaMGP_NZOHlLtJ_P0037874
 
Protein coding
--
MGP_NZOHlLtJ_T0037875.1-809174aaMGP_NZOHlLtJ_P0037875
 
Protein coding
--
MGP_NZOHlLtJ_T0037871.1-7655581aaMGP_NZOHlLtJ_P0037871
 
Nonsense mediated decay
--
MGP_NZOHlLtJ_T0037873.1-3418426aaMGP_NZOHlLtJ_P0037873
 
Nonsense mediated decay
--
MGP_NZOHlLtJ_T0037872.1-305No protein-
 
Retained intron
--

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 7,091 bps, Translation length: 1,434 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61115

CCDS

This transcript is a member of the Mouse NZO/HlLtJ CCDS set: CCDS26592

Version

MGP_NZOHlLtJ_T0037870.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.