Transcript: MGP_NODShiLtJ_T0088776.1

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:MGI Symbol;Acc:MGI:2136689]

Gene Synonyms

R27090_2

Location

Chromosome 8: 78,520,138-78,532,511 reverse strand.

Reference strain equivalent

Ddx49

About this transcript

This transcript has 13 exons, is annotated with 20 domains and features and maps to 238 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0033504.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0088776.1	-	2137	480aa	MGP_NODShiLtJ_P0088776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22364	Q4FZF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0088777.1	-	2163	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0088780.1	-	1441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0088778.1	-	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0088781.1	-	304	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0088779.1	-	1107	354aa	MGP_NODShiLtJ_P0088779	Unknown likely coding		-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,137 bps, Translation length: 480 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4FZF3

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS22364

Version

MGP_NODShiLtJ_T0088776.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0088776.1

Summary

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Transcript: MGP_NODShiLtJ_T0088776.1

Summary

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