Transcript: MGP_NODShiLtJ_T0061519.1

Description

a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]

Gene Synonyms

AD56, MDC15, Mdc15, metargidin

Location

Chromosome 3: 102,331,230-102,342,681 reverse strand.

Reference strain equivalent

Adam15

About this transcript

This transcript has 24 exons, is annotated with 1 domain and feature and maps to 489 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0027247.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0061521.1	-	2975	864aa	MGP_NODShiLtJ_P0061521	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0061520.1	-	2893	839aa	MGP_NODShiLtJ_P0061520	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0061525.1	-	2799	815aa	MGP_NODShiLtJ_P0061525	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0061524.1	-	1686	448aa	MGP_NODShiLtJ_P0061524	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0061519.1	-	3914	864aa	MGP_NODShiLtJ_P0061519	Nonsense mediated decay	CCDS17502, CCDS17503	O88839	-
MGP_NODShiLtJ_T0061522.1	-	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0061523.1	-	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0061531.1	-	403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0061529.1	-	3053	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0061530.1	-	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0061528.1	-	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0061527.1	-	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0061526.1	-	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 3,914 bps, Translation length: 864 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88839

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS17502, CCDS17503

Version

MGP_NODShiLtJ_T0061519.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0061519.1

Summary

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Transcript: MGP_NODShiLtJ_T0061519.1

Summary

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