Transcript: MGP_NODShiLtJ_T0043115.1

Description

phosphatidylinositol 4-kinase, catalytic, alpha polypeptide [Source:MGI Symbol;Acc:MGI:2448506]

Gene Synonyms

Pik4ca

Location

Chromosome 16: 15,005,217-15,153,598 reverse strand.

Reference strain equivalent

Pi4ka

About this transcript

This transcript has 55 exons, is annotated with 24 domains and features and maps to 517 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0022406.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0043119.1	-	6630	2044aa	MGP_NODShiLtJ_P0043119	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0043115.1	-	6431	2044aa	MGP_NODShiLtJ_P0043115	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37271	A0A140T8I9 D6RJ66 F6WIX7 F6XSW4 F6Y9T6	-
MGP_NODShiLtJ_T0043124.1	-	958	318aa	MGP_NODShiLtJ_P0043124	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0043118.1	-	849	209aa	MGP_NODShiLtJ_P0043118	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0043123.1	-	888	74aa	MGP_NODShiLtJ_P0043123	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0043122.1	-	803	142aa	MGP_NODShiLtJ_P0043122	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0043128.1	-	3855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0043117.1	-	1504	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0043116.1	-	976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0043121.1	-	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0043120.1	-	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0043125.1	-	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 55, Coding exons: 54, Transcript length: 6,431 bps, Translation length: 2,044 residues

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS37271

Version

MGP_NODShiLtJ_T0043115.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0043115.1

Summary

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Transcript: MGP_NODShiLtJ_T0043115.1

Summary

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