Transcript: MGP_NODShiLtJ_T0019395.1

Description

transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]

Gene Synonyms

3110018K12Rik, AU024090, AU042859, AW742551, Trap1

Location

Chromosome 1: 47,017,887-47,073,008 reverse strand.

Reference strain equivalent

Tgfbrap1

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features and maps to 189 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0015843.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0019395.1	-	5616	860aa	MGP_NODShiLtJ_P0019395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14920	A0A087WQF3 A0A087WQX7 A0A087WR01 Q3UR70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0019396.1	-	5394	860aa	MGP_NODShiLtJ_P0019396	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0019398.1	-	831	254aa	MGP_NODShiLtJ_P0019398	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0019402.1	-	785	107aa	MGP_NODShiLtJ_P0019402	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0019399.1	-	697	52aa	MGP_NODShiLtJ_P0019399	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0019401.1	-	3255	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0019397.1	-	3160	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0019400.1	-	1793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 5,616 bps, Translation length: 860 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UR70

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS14920

Version

MGP_NODShiLtJ_T0019395.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0019395.1

Summary

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Transcript: MGP_NODShiLtJ_T0019395.1

Summary

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