Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: MGP_NODShiLtJ_T0072559.1

.

Description

RIKEN cDNA 1700016H13 gene [Source:MGI Symbol;Acc:MGI:1921468]

Location

Chromosome 5: 118,348,189-118,359,311 reverse strand.

Reference strain equivalent

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features and maps to 120 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0029603.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0072559.1	-	1447	117aa	MGP_NODShiLtJ_P0072559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51575	Q810Q2 Q9DAA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0072560.1	-	1104	117aa	MGP_NODShiLtJ_P0072560	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072562.1	-	797	117aa	MGP_NODShiLtJ_P0072562	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072564.1	-	612	117aa	MGP_NODShiLtJ_P0072564	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072561.1	-	933	37aa	MGP_NODShiLtJ_P0072561	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0072563.1	-	663	37aa	MGP_NODShiLtJ_P0072563	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0072565.1	-	609	37aa	MGP_NODShiLtJ_P0072565	Nonsense mediated decay		-	-

.

Protein summary

.

Protein domains for MGP_NODShiLtJ_P0072559.

.