Transcript: MGP_LPJ_T0095166.1

Description

calcium channel, voltage-dependent, alpha 1F subunit [Source:MGI Symbol;Acc:MGI:1859639]

Gene Synonyms

A930034B14, Cav1.4, Sfc17, nerg1, nob2

Location

Chromosome X: 2,221,319-2,249,517 forward strand.

Reference strain equivalent

Cacna1f

About this transcript

This transcript has 48 exons, is annotated with 4 domains and features and maps to 431 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0035400.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0095168.1	-	6079	1984aa	MGP_LPJ_P0095168	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0095170.1	-	6028	1977aa	MGP_LPJ_P0095170	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0095169.1	-	2559	844aa	MGP_LPJ_P0095169	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0095174.1	-	921	247aa	MGP_LPJ_P0095174	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0095173.1	-	869	229aa	MGP_LPJ_P0095173	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0095166.1	-	6058	431aa	MGP_LPJ_P0095166	Nonsense mediated decay	CCDS40840	B1AVA4 B1AVA5 B1AVA6 Q7TNI3 Q8C8Q4 S4R182	-
MGP_LPJ_T0095171.1	-	6622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0095167.1	-	3838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0095176.1	-	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0095172.1	-	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0095175.1	-	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 48, Coding exons: 10, Transcript length: 6,058 bps, Translation length: 431 residues

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS40840

Version

MGP_LPJ_T0095166.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0095166.1

Summary

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Transcript: MGP_LPJ_T0095166.1

Summary

About Us

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