Ensembl mirror
More ▼
Search »
Mouse LP/J (LP_J_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_LPJ_T0094590.1

Description

chondroitin sulfate proteoglycan 5 [Source:MGI Symbol;Acc:MGI:1352747]

Gene Synonyms

CALEB, Caleb, NGC, Ngc, neuroglycan C

Location

Chromosome 9: 112,681,038-112,697,902 forward strand.

Reference strain equivalent

Cspg5

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features and maps to 215 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0035232.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0094593.1-7827569aaMGP_LPJ_P0094593
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0094590.1-3870566aaMGP_LPJ_P0094590
 
Protein coding
CCDS52936, CCDS81085Q71M36 -
MGP_LPJ_T0094591.1-3790539aaMGP_LPJ_P0094591
 
Protein coding
--
MGP_LPJ_T0094594.1-2107458aaMGP_LPJ_P0094594
 
Protein coding
--
MGP_LPJ_T0094592.1-1523No protein-
 
Retained intron
--

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,870 bps, Translation length: 566 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q71M36

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS52936, CCDS81085

Version

MGP_LPJ_T0094590.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.