Mouse LP/J (LP_J_v1)
Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B [Source:MGI Symbol;Acc:MGI:107561]

Gene Synonyms

LUCA-1, SemA, Semaa, sema5, semaV

Reference strain equivalent
About this transcript

This transcript has 18 exons, is annotated with 6 domains and features and maps to 353 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0094031.1-3410749aaMGP_LPJ_P0094031
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0094030.1-3191749aaMGP_LPJ_P0094030
 
Protein coding
--
MGP_LPJ_T0094032.1-2987749aaMGP_LPJ_P0094032
 
Protein coding
--
MGP_LPJ_T0094033.1-2958749aaMGP_LPJ_P0094033
 
Protein coding
--
MGP_LPJ_T0094034.1-2875749aaMGP_LPJ_P0094034
 
Protein coding
--
MGP_LPJ_T0094038.1-1023147aaMGP_LPJ_P0094038
 
Protein coding
--
MGP_LPJ_T0094037.1-709172aaMGP_LPJ_P0094037
 
Protein coding
--
MGP_LPJ_T0094039.1-623137aaMGP_LPJ_P0094039
 
Protein coding
--
MGP_LPJ_T0094041.1-45310aaMGP_LPJ_P0094041
 
Protein coding
--
MGP_LPJ_T0094040.1-34848aaMGP_LPJ_P0094040
 
Protein coding
--
MGP_LPJ_T0094029.1-3433534aaMGP_LPJ_P0094029
 
Nonsense mediated decay
CCDS23501A0A0A6YW56 A0A0A6YWM9 A0A0A6YWW1
A0A0A6YXC1 A0A0G2JDD7 M0QWQ7
M9MMK0
-
MGP_LPJ_T0094042.1-358No protein-
 
Processed transcript
--
MGP_LPJ_T0094035.1-827No protein-
 
Retained intron
--
MGP_LPJ_T0094036.1-358No protein-
 
Retained intron
--
Statistics

Exons: 18, Coding exons: 15, Transcript length: 3,433 bps, Translation length: 534 residues

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS23501

Version

MGP_LPJ_T0094029.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.