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Transcript: MGP_LPJ_T0077497.1

Description

phosphodiesterase 1C [Source:MGI Symbol;Acc:MGI:108413]

Location

Chromosome 6: 55,441,568-55,723,346 reverse strand.

Reference strain equivalent

Pde1c

About this transcript

This transcript has 19 exons, is annotated with 30 domains and features and maps to 249 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0030681.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0077498.1-3146766aaMGP_LPJ_P0077498
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0077504.1-8791631aaMGP_LPJ_P0077504
 
Protein coding
--
MGP_LPJ_T0077500.1-6758654aaMGP_LPJ_P0077500
 
Protein coding
--
MGP_LPJ_T0077505.1-4731603aaMGP_LPJ_P0077505
 
Protein coding
--
MGP_LPJ_T0077497.1-3907706aaMGP_LPJ_P0077497
 
Protein coding
CCDS20170, CCDS51783, CCDS51784, CCDS51785, CCDS51786, CCDS51787A0A0N4SW87 A0A0N4SWG4 E9Q7V6
Q5D0E7 Q64338 Q8CDV2
Q9D5W0 		-
MGP_LPJ_T0077506.1-3448631aaMGP_LPJ_P0077506
 
Protein coding
--
MGP_LPJ_T0077507.1-3067622aaMGP_LPJ_P0077507
 
Protein coding
--
MGP_LPJ_T0077501.1-2132617aaMGP_LPJ_P0077501
 
Protein coding
--
MGP_LPJ_T0077503.1-2126654aaMGP_LPJ_P0077503
 
Protein coding
--
MGP_LPJ_T0077502.1-44246aaMGP_LPJ_P0077502
 
Nonsense mediated decay
--
MGP_LPJ_T0077499.1-2086No protein-
 
Processed transcript
--
MGP_LPJ_T0077509.1-3935No protein-
 
Retained intron
--
MGP_LPJ_T0077508.1-1429No protein-
 
Retained intron
--
MGP_LPJ_T0077510.1-329No protein-
 
Retained intron
--

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,907 bps, Translation length: 706 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64338

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS20170, CCDS51783, CCDS51784, CCDS51785, CCDS51786, CCDS51787

Version

MGP_LPJ_T0077497.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.