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Transcript: MGP_LPJ_T0070071.1

Description

putative homeodomain transcription factor 2 [Source:MGI Symbol;Acc:MGI:1916020]

Gene Synonyms

1110054G21Rik, 9530062N20Rik, AI447096, C77923

Location

Chromosome 5: 18,694,937-18,814,791 reverse strand.

Reference strain equivalent

Phtf2

About this transcript

This transcript has 18 exons, is annotated with 18 domains and features and maps to 351 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0029209.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0070071.1-4848747aaMGP_LPJ_P0070071
 
Protein coding
CCDS51426A0A0R4J1Q1 D6RJJ1 F6W0Y3
F6X6S4 		Ensembl Canonical
MGP_LPJ_T0070072.1-2280169aaMGP_LPJ_P0070072
 
Nonsense mediated decay
--
MGP_LPJ_T0070074.1-62119aaMGP_LPJ_P0070074
 
Nonsense mediated decay
--
MGP_LPJ_T0070077.1-48053aaMGP_LPJ_P0070077
 
Nonsense mediated decay
--
MGP_LPJ_T0070073.1-520No protein-
 
Processed transcript
--
MGP_LPJ_T0070075.1-2045No protein-
 
Retained intron
--
MGP_LPJ_T0070076.1-1994No protein-
 
Retained intron
--

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,848 bps, Translation length: 747 residues

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS51426

Version

MGP_LPJ_T0070071.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.