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Transcript: MGP_LPJ_T0063921.1

Description

PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]

Gene Synonyms

1110001A05Rik, AI987914, C87059, Enh, Enh1, Enh2, Enh3, LIM

Location

Chromosome 3: 146,852,133-147,013,782 reverse strand.

Reference strain equivalent

Pdlim5

About this transcript

This transcript has 13 exons, is annotated with 43 domains and features and maps to 426 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0027865.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0063925.1-1845614aaMGP_LPJ_P0063925
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0063921.1-5010591aaMGP_LPJ_P0063921
 
Protein coding
CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039A0A0G2JEJ0 A0A0G2JGZ5 D9J2Z9
D9J300 D9J301 D9J302
D9J303 E9Q8P5 F8WJI6
Q8CI51 Q9CRA2 		-
MGP_LPJ_T0063929.1-1853239aaMGP_LPJ_P0063929
 
Protein coding
--
MGP_LPJ_T0063922.1-1725574aaMGP_LPJ_P0063922
 
Protein coding
--
MGP_LPJ_T0063931.1-1598234aaMGP_LPJ_P0063931
 
Protein coding
--
MGP_LPJ_T0063924.1-1581526aaMGP_LPJ_P0063924
 
Protein coding
--
MGP_LPJ_T0063930.1-1565214aaMGP_LPJ_P0063930
 
Protein coding
--
MGP_LPJ_T0063923.1-1555482aaMGP_LPJ_P0063923
 
Protein coding
--
MGP_LPJ_T0063932.1-1196337aaMGP_LPJ_P0063932
 
Protein coding
--
MGP_LPJ_T0063933.1-873239aaMGP_LPJ_P0063933
 
Protein coding
--
MGP_LPJ_T0063928.1-759252aaMGP_LPJ_P0063928
 
Protein coding
--
MGP_LPJ_T0063927.1-669222aaMGP_LPJ_P0063927
 
Protein coding
--
MGP_LPJ_T0063926.1-2100No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,010 bps, Translation length: 591 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CI51

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039

Version

MGP_LPJ_T0063921.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.