Transcript: MGP_LPJ_T0051631.1

Description

MMS19 (MET18 S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919449]

Gene Synonyms

2410001K24Rik, 2610042O15Rik, AI316855, C79368, C86341, Mms19, Mms19l

Location

Chromosome 19: 41,238,224-41,278,702 reverse strand.

Reference strain equivalent

Mms19

About this transcript

This transcript has 30 exons, is annotated with 6 domains and features and maps to 455 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0025062.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0051632.1	-	6629	1031aa	MGP_LPJ_P0051632	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0051637.1	-	3162	988aa	MGP_LPJ_P0051637	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0051634.1	-	3002	885aa	MGP_LPJ_P0051634	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0051641.1	-	859	286aa	MGP_LPJ_P0051641	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0051648.1	-	387	128aa	MGP_LPJ_P0051648	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0051631.1	-	7899	357aa	MGP_LPJ_P0051631	Nonsense mediated decay	CCDS29818	E9PUY8 E9PW47 E9Q5T0 F6RGK4 F6TJQ8 F7A0X7 F7C9N6 Q9D071	-
MGP_LPJ_T0051635.1	-	3412	75aa	MGP_LPJ_P0051635	Nonsense mediated decay		-	-
MGP_LPJ_T0051636.1	-	3378	75aa	MGP_LPJ_P0051636	Nonsense mediated decay		-	-
MGP_LPJ_T0051643.1	-	2630	174aa	MGP_LPJ_P0051643	Nonsense mediated decay		-	-
MGP_LPJ_T0051645.1	-	2368	357aa	MGP_LPJ_P0051645	Nonsense mediated decay		-	-
MGP_LPJ_T0051638.1	-	1859	500aa	MGP_LPJ_P0051638	Nonsense mediated decay		-	-
MGP_LPJ_T0051633.1	-	3771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051640.1	-	2810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051644.1	-	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051642.1	-	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051639.1	-	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051647.1	-	240	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0051646.1	-	141	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 30, Coding exons: 13, Transcript length: 7,899 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D071

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS29818

Version

MGP_LPJ_T0051631.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0051631.1

Summary

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Transcript: MGP_LPJ_T0051631.1

Summary

About Us

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