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Transcript: MGP_LPJ_T0050847.1

Description

Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]

Gene Synonyms

2900097C17Rik, AI046355, Gng3lg, seipin

Location

Chromosome 19: 6,008,783-6,019,927 forward strand.

Reference strain equivalent

Bscl2

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features and maps to 269 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0024736.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0050847.1-1962443aaMGP_LPJ_P0050847
 
Protein coding
CCDS29551, CCDS70931A0A0R4J225 E0CXJ2 F6US45
Q9Z2E9 		Ensembl Canonical
MGP_LPJ_T0050850.1-1795383aaMGP_LPJ_P0050850
 
Protein coding
--
MGP_LPJ_T0050849.1-1684383aaMGP_LPJ_P0050849
 
Protein coding
--
MGP_LPJ_T0050853.1-1388383aaMGP_LPJ_P0050853
 
Protein coding
--
MGP_LPJ_T0050852.1-1646213aaMGP_LPJ_P0050852
 
Nonsense mediated decay
--
MGP_LPJ_T0050856.1-685134aaMGP_LPJ_P0050856
 
Nonsense mediated decay
--
MGP_LPJ_T0050848.1-846No protein-
 
Processed transcript
--
MGP_LPJ_T0050854.1-3495No protein-
 
Retained intron
--
MGP_LPJ_T0050851.1-2806No protein-
 
Retained intron
--
MGP_LPJ_T0050855.1-1911No protein-
 
Retained intron
--

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,962 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Z2E9

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS29551, CCDS70931

Version

MGP_LPJ_T0050847.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.