Transcript: MGP_LPJ_T0050477.1

Description

D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529]

Gene Synonyms

2210010M07Rik, BAF45D, Baf45d, Req, Ubid4, requiem, ubi-d4

Location

Chromosome 19: 2,862,844-2,883,866 reverse strand.

Reference strain equivalent

Dpf2

About this transcript

This transcript has 11 exons, is annotated with 25 domains and features and maps to 159 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0024651.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0050477.1	-	2715	391aa	MGP_LPJ_P0050477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37892, CCDS70920	D3Z5N6 F8WIP7 Q61103	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0050484.1	-	370	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0050483.1	-	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0050480.1	-	2167	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0050478.1	-	1115	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0050481.1	-	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0050482.1	-	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0050479.1	-	1218	405aa	MGP_LPJ_P0050479	Unknown likely coding		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,715 bps, Translation length: 391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61103

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS37892, CCDS70920

Version

MGP_LPJ_T0050477.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0050477.1

Summary

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Transcript: MGP_LPJ_T0050477.1

Summary

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