Transcript: MGP_LPJ_T0047729.1

Description

polymerase (RNA) I polypeptide C [Source:MGI Symbol;Acc:MGI:103288]

Gene Synonyms

40kDa, AA409007, AA959927, AL024089, Polr1e, RPA40, Rpo1-1

Location

Chromosome 17: 47,968,058-47,972,192 reverse strand.

Reference strain equivalent

Polr1c

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features and maps to 273 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0023716.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0047729.1	-	1314	346aa	MGP_LPJ_P0047729	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37632	D3Z3D6 D3Z7Q8 G3UX92 G3UXX5 P52432	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0047730.1	-	829	260aa	MGP_LPJ_P0047730	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0047732.1	-	771	255aa	MGP_LPJ_P0047732	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0047733.1	-	516	170aa	MGP_LPJ_P0047733	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0047734.1	-	432	103aa	MGP_LPJ_P0047734	Nonsense mediated decay		-	-
MGP_LPJ_T0047731.1	-	870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0047735.1	-	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0047736.1	-	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,314 bps, Translation length: 346 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52432

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS37632

Version

MGP_LPJ_T0047729.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0047729.1

Summary

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Transcript: MGP_LPJ_T0047729.1

Summary

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