Transcript: MGP_LPJ_T0043618.1

Description

chloride channel, voltage-sensitive 2 [Source:MGI Symbol;Acc:MGI:105061]

Gene Synonyms

AL118368, ClC-2, Clc2, nmf240

Location

Chromosome 16: 17,776,622-17,790,030 reverse strand.

Reference strain equivalent

Clcn2

About this transcript

This transcript has 24 exons, is annotated with 45 domains and features and maps to 290 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0022555.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0043618.1	-	3128	908aa	MGP_LPJ_P0043618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28057	A9C437 D6RFS3 Q9R0A1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0043621.1	-	2812	891aa	MGP_LPJ_P0043621	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0043622.1	-	3890	533aa	MGP_LPJ_P0043622	Nonsense mediated decay		-	-
MGP_LPJ_T0043619.1	-	3757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043620.1	-	3511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043623.1	-	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043626.1	-	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043625.1	-	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043624.1	-	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,128 bps, Translation length: 908 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R0A1

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS28057

Version

MGP_LPJ_T0043618.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0043618.1

Summary

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Transcript: MGP_LPJ_T0043618.1

Summary

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