Transcript: MGP_LPJ_T0043559.1

Description

von Willebrand factor A domain containing 5B2 [Source:MGI Symbol;Acc:MGI:2681859]

Gene Synonyms

BB182430, EG328644, Gm1738, Gm931

Location

Chromosome 16: 17,657,350-17,667,710 forward strand.

Reference strain equivalent

Vwa5b2

About this transcript

This transcript has 15 exons, is annotated with 12 domains and features and maps to 141 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0022548.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0043561.1	-	4527	1248aa	MGP_LPJ_P0043561	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0043568.1	-	4042	1248aa	MGP_LPJ_P0043568	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0043559.1	-	2512	602aa	MGP_LPJ_P0043559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37288, CCDS49792	E0CZ01 F2Z3U9 Q3UR50	-
MGP_LPJ_T0043567.1	-	2335	413aa	MGP_LPJ_P0043567	Nonsense mediated decay		-	-
MGP_LPJ_T0043562.1	-	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0043560.1	-	251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0043569.1	-	2520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043566.1	-	1983	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043563.1	-	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043565.1	-	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0043564.1	-	4886	1240aa	MGP_LPJ_P0043564	Unknown likely coding		-	-

Summary

Statistics

Exons: 15, Coding exons: 11, Transcript length: 2,512 bps, Translation length: 602 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UR50

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS37288, CCDS49792

Version

MGP_LPJ_T0043559.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0043559.1

Summary

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Transcript: MGP_LPJ_T0043559.1

Summary

About Us

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