Ensembl mirror
More ▼
Search »
Mouse LP/J (LP_J_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_LPJ_T0040082.1

Description

protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]

Gene Synonyms

1500001L12Rik, A730003J17Rik, C530050I23Rik, C630029H24Rik, LOC382930

Location

Chromosome 14: 89,756,767-90,699,909 reverse strand.

Reference strain equivalent

Pcdh9

About this transcript

This transcript has 5 exons, is annotated with 66 domains and features and maps to 312 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0021512.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0040082.1-65211237aaMGP_LPJ_P0040082
 
Protein coding
CCDS36992, CCDS79350, CCDS79352A0A0A6YVP5 A0A0A6YWM0 A0A0A6YWY8
A0A0A6YY09 A0A0A6YY37 F8VPK8
Ensembl Canonical
MGP_LPJ_T0040083.1-61271203aaMGP_LPJ_P0040083
 
Protein coding
--
MGP_LPJ_T0040084.1-51611038aaMGP_LPJ_P0040084
 
Protein coding
--
MGP_LPJ_T0040085.1-50961195aaMGP_LPJ_P0040085
 
Protein coding
--
MGP_LPJ_T0040086.1-37141237aaMGP_LPJ_P0040086
 
Protein coding
--
MGP_LPJ_T0040089.1-3014873aaMGP_LPJ_P0040089
 
Protein coding
--
MGP_LPJ_T0040087.1-35484aaMGP_LPJ_P0040087
 
Protein coding
--
MGP_LPJ_T0040088.1-656No protein-
 
Retained intron
--

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 6,521 bps, Translation length: 1,237 residues

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS36992, CCDS79350, CCDS79352

Version

MGP_LPJ_T0040082.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.